Control:Article Title: Intracellular bacteria modulate the immune microenvironment of oral squamous cell carcinoma.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Anti-mouse PD-1 antibody MCE Cat# HY-P99144, RRID:AB_3718703 Mouse IgG isotype control MCE Cat# HY-P80757;AB_3102181 Bacterial and virus strains Fusobacterium nucleatum Ningbo Mingzhou Biotechnology Co., Ltd. Cat# B86001 Streptococcus pneumoniae Ningbo Mingzhou Biotechnology Co., Ltd. Cat# B80924 Capnocytophaga leadbetteri Ningbo Mingzhou Biotechnology Co., Ltd. Cat# B290181 Biological samples Human OSCC tumor This paper See Tables S1, S2, S3, and S4 for details Chemicals, peptides, and recombinant proteins DMEM Procell Life Science & Technology Co., Ltd. Cat# PM150210 Fluid Thioglycollate Medium Haibo Biotechnology Cat# HB5190-5 Tryptic Soy Broth Haibo Biotechnology Cat# HB4114 Chocolate Blood Agar Medium Guangdong Huankai Microbial Sci.&Tech. .. Co., Ltd. Cat# 029032 Fetal Bovine Serum Procell Life Science & Technology Co., Ltd. Cat# 164210 Penicillin-Streptomycin Solution Procell Life Science & Technology Co., Ltd. Cat# PB180120 Trypsin-EDTA (0.25%) HyClone Cat# SH30042.01 PBS Procell Life Science & Technology Co., Ltd. Cat# PB180327 4% Paraformaldehyde BOSTER Biological Technology Co., Ltd. Cat# AR1069 1% Crystal Violet Solution Beijing Solarbio Science & Technology Co., Ltd. Cat# G1062 Critical commercial assays Chromium Next GEM Chip G Single Cell Kit 10xGenomics 48 rxns PN-1000286 Paired-end Index Kit T SetA 10xGenomics 16 rxns PN-1000190 Chromium Next GEM Single Cell 5ʹ Kit v2 10xGenomics 16 rxns PN-1000263 Library Construction Kit 10xGenomics PN-100215 Visium Spatial Tissue Optimization Slide Reagents Kit, 4 samples 10xGenomics PN-1000193 Visium Spatial Gene Expression Slide Reagents Kit, 10xGenomics 16rxns PN-1000184 Qubit dsDNA Assay Kit Life Technologies Cat#Q32854 Tks Gflex DNA Polymerase Takara Cat #R0608 Cell Counting Kit-8(CCK-8) Beyotime Biotechnology Inc. Cat #C0037 Deposited data INVADE seq This paper BioProject: PRJCA034157 and GSA: HRA009876 (https:// ngdc.cncb.ac.cn/gsa-human/ browse/HRA009876) https://doi.org/10.5281/zenodo.17697124 16SrDNA-seq This paper BioProject: PRJCA051955 and GSA:CRA034194 (https:// ngdc.cncb.ac.cn/gsa/browse/CRA034194) 2bRAD seq This paper BioProject: PRJCA051955 and GSA:CRA034193 (https:// ngdc.cncb.ac.cn/gsa/browse/CRA034193) (Continued on next page) Cell Reports 45, 117019, March 24, 2026 17
Virus:Article Title: Intracellular bacteria modulate the immune microenvironment of oral squamous cell carcinoma.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Anti-mouse PD-1 antibody MCE Cat# HY-P99144, RRID:AB_3718703 Mouse IgG isotype control MCE Cat# HY-P80757;AB_3102181 Bacterial and virus strains Fusobacterium nucleatum Ningbo Mingzhou Biotechnology Co., Ltd. Cat# B86001 Streptococcus pneumoniae Ningbo Mingzhou Biotechnology Co., Ltd. Cat# B80924 Capnocytophaga leadbetteri Ningbo Mingzhou Biotechnology Co., Ltd. Cat# B290181 Biological samples Human OSCC tumor This paper See Tables S1, S2, S3, and S4 for details Chemicals, peptides, and recombinant proteins DMEM Procell Life Science & Technology Co., Ltd. Cat# PM150210 Fluid Thioglycollate Medium Haibo Biotechnology Cat# HB5190-5 Tryptic Soy Broth Haibo Biotechnology Cat# HB4114 Chocolate Blood Agar Medium Guangdong Huankai Microbial Sci.&Tech. .. Co., Ltd. Cat# 029032 Fetal Bovine Serum Procell Life Science & Technology Co., Ltd. Cat# 164210 Penicillin-Streptomycin Solution Procell Life Science & Technology Co., Ltd. Cat# PB180120 Trypsin-EDTA (0.25%) HyClone Cat# SH30042.01 PBS Procell Life Science & Technology Co., Ltd. Cat# PB180327 4% Paraformaldehyde BOSTER Biological Technology Co., Ltd. Cat# AR1069 1% Crystal Violet Solution Beijing Solarbio Science & Technology Co., Ltd. Cat# G1062 Critical commercial assays Chromium Next GEM Chip G Single Cell Kit 10xGenomics 48 rxns PN-1000286 Paired-end Index Kit T SetA 10xGenomics 16 rxns PN-1000190 Chromium Next GEM Single Cell 5ʹ Kit v2 10xGenomics 16 rxns PN-1000263 Library Construction Kit 10xGenomics PN-100215 Visium Spatial Tissue Optimization Slide Reagents Kit, 4 samples 10xGenomics PN-1000193 Visium Spatial Gene Expression Slide Reagents Kit, 10xGenomics 16rxns PN-1000184 Qubit dsDNA Assay Kit Life Technologies Cat#Q32854 Tks Gflex DNA Polymerase Takara Cat #R0608 Cell Counting Kit-8(CCK-8) Beyotime Biotechnology Inc. Cat #C0037 Deposited data INVADE seq This paper BioProject: PRJCA034157 and GSA: HRA009876 (https:// ngdc.cncb.ac.cn/gsa-human/ browse/HRA009876) https://doi.org/10.5281/zenodo.17697124 16SrDNA-seq This paper BioProject: PRJCA051955 and GSA:CRA034194 (https:// ngdc.cncb.ac.cn/gsa/browse/CRA034194) 2bRAD seq This paper BioProject: PRJCA051955 and GSA:CRA034193 (https:// ngdc.cncb.ac.cn/gsa/browse/CRA034193) (Continued on next page) Cell Reports 45, 117019, March 24, 2026 17
Recombinant:Article Title: Intracellular bacteria modulate the immune microenvironment of oral squamous cell carcinoma.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Anti-mouse PD-1 antibody MCE Cat# HY-P99144, RRID:AB_3718703 Mouse IgG isotype control MCE Cat# HY-P80757;AB_3102181 Bacterial and virus strains Fusobacterium nucleatum Ningbo Mingzhou Biotechnology Co., Ltd. Cat# B86001 Streptococcus pneumoniae Ningbo Mingzhou Biotechnology Co., Ltd. Cat# B80924 Capnocytophaga leadbetteri Ningbo Mingzhou Biotechnology Co., Ltd. Cat# B290181 Biological samples Human OSCC tumor This paper See Tables S1, S2, S3, and S4 for details Chemicals, peptides, and recombinant proteins DMEM Procell Life Science & Technology Co., Ltd. Cat# PM150210 Fluid Thioglycollate Medium Haibo Biotechnology Cat# HB5190-5 Tryptic Soy Broth Haibo Biotechnology Cat# HB4114 Chocolate Blood Agar Medium Guangdong Huankai Microbial Sci.&Tech. .. Co., Ltd. Cat# 029032 Fetal Bovine Serum Procell Life Science & Technology Co., Ltd. Cat# 164210 Penicillin-Streptomycin Solution Procell Life Science & Technology Co., Ltd. Cat# PB180120 Trypsin-EDTA (0.25%) HyClone Cat# SH30042.01 PBS Procell Life Science & Technology Co., Ltd. Cat# PB180327 4% Paraformaldehyde BOSTER Biological Technology Co., Ltd. Cat# AR1069 1% Crystal Violet Solution Beijing Solarbio Science & Technology Co., Ltd. Cat# G1062 Critical commercial assays Chromium Next GEM Chip G Single Cell Kit 10xGenomics 48 rxns PN-1000286 Paired-end Index Kit T SetA 10xGenomics 16 rxns PN-1000190 Chromium Next GEM Single Cell 5ʹ Kit v2 10xGenomics 16 rxns PN-1000263 Library Construction Kit 10xGenomics PN-100215 Visium Spatial Tissue Optimization Slide Reagents Kit, 4 samples 10xGenomics PN-1000193 Visium Spatial Gene Expression Slide Reagents Kit, 10xGenomics 16rxns PN-1000184 Qubit dsDNA Assay Kit Life Technologies Cat#Q32854 Tks Gflex DNA Polymerase Takara Cat #R0608 Cell Counting Kit-8(CCK-8) Beyotime Biotechnology Inc. Cat #C0037 Deposited data INVADE seq This paper BioProject: PRJCA034157 and GSA: HRA009876 (https:// ngdc.cncb.ac.cn/gsa-human/ browse/HRA009876) https://doi.org/10.5281/zenodo.17697124 16SrDNA-seq This paper BioProject: PRJCA051955 and GSA:CRA034194 (https:// ngdc.cncb.ac.cn/gsa/browse/CRA034194) 2bRAD seq This paper BioProject: PRJCA051955 and GSA:CRA034193 (https:// ngdc.cncb.ac.cn/gsa/browse/CRA034193) (Continued on next page) Cell Reports 45, 117019, March 24, 2026 17
Chocolate:Article Title: Intracellular bacteria modulate the immune microenvironment of oral squamous cell carcinoma.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Anti-mouse PD-1 antibody MCE Cat# HY-P99144, RRID:AB_3718703 Mouse IgG isotype control MCE Cat# HY-P80757;AB_3102181 Bacterial and virus strains Fusobacterium nucleatum Ningbo Mingzhou Biotechnology Co., Ltd. Cat# B86001 Streptococcus pneumoniae Ningbo Mingzhou Biotechnology Co., Ltd. Cat# B80924 Capnocytophaga leadbetteri Ningbo Mingzhou Biotechnology Co., Ltd. Cat# B290181 Biological samples Human OSCC tumor This paper See Tables S1, S2, S3, and S4 for details Chemicals, peptides, and recombinant proteins DMEM Procell Life Science & Technology Co., Ltd. Cat# PM150210 Fluid Thioglycollate Medium Haibo Biotechnology Cat# HB5190-5 Tryptic Soy Broth Haibo Biotechnology Cat# HB4114 Chocolate Blood Agar Medium Guangdong Huankai Microbial Sci.&Tech. .. Co., Ltd. Cat# 029032 Fetal Bovine Serum Procell Life Science & Technology Co., Ltd. Cat# 164210 Penicillin-Streptomycin Solution Procell Life Science & Technology Co., Ltd. Cat# PB180120 Trypsin-EDTA (0.25%) HyClone Cat# SH30042.01 PBS Procell Life Science & Technology Co., Ltd. Cat# PB180327 4% Paraformaldehyde BOSTER Biological Technology Co., Ltd. Cat# AR1069 1% Crystal Violet Solution Beijing Solarbio Science & Technology Co., Ltd. Cat# G1062 Critical commercial assays Chromium Next GEM Chip G Single Cell Kit 10xGenomics 48 rxns PN-1000286 Paired-end Index Kit T SetA 10xGenomics 16 rxns PN-1000190 Chromium Next GEM Single Cell 5ʹ Kit v2 10xGenomics 16 rxns PN-1000263 Library Construction Kit 10xGenomics PN-100215 Visium Spatial Tissue Optimization Slide Reagents Kit, 4 samples 10xGenomics PN-1000193 Visium Spatial Gene Expression Slide Reagents Kit, 10xGenomics 16rxns PN-1000184 Qubit dsDNA Assay Kit Life Technologies Cat#Q32854 Tks Gflex DNA Polymerase Takara Cat #R0608 Cell Counting Kit-8(CCK-8) Beyotime Biotechnology Inc. Cat #C0037 Deposited data INVADE seq This paper BioProject: PRJCA034157 and GSA: HRA009876 (https:// ngdc.cncb.ac.cn/gsa-human/ browse/HRA009876) https://doi.org/10.5281/zenodo.17697124 16SrDNA-seq This paper BioProject: PRJCA051955 and GSA:CRA034194 (https:// ngdc.cncb.ac.cn/gsa/browse/CRA034194) 2bRAD seq This paper BioProject: PRJCA051955 and GSA:CRA034193 (https:// ngdc.cncb.ac.cn/gsa/browse/CRA034193) (Continued on next page) Cell Reports 45, 117019, March 24, 2026 17
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